Abouzar Kaboudian
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Journal articles

  1. P. Pathmanathan, S.K. Galappaththige, J.M. Cordeiro, A. Kaboudian, F.H. Fenton, R.A. Gray. "Data-Driven Uncertainty Quantification for Cardiac Electrophysiological Models: Impact of Physiological Variability on Action Potential and Spiral Wave Dynamics" Frontiers in Physiology 11 (2020): 1463, https://doi.org/10.3389/fphys.2020.585400.
  2. Uzelac, Ilija, Shahriar Iravanian, Hiroshi Ashikaga, Neal K. Bhatia, Conner Herndon, Abouzar Kaboudian, James C. Gumbart, Elizabeth M. Cherry, and Flavio H. Fenton. "Fatal arrhythmias: Another reason why doctors remain cautious about chloroquine/hydroxychloroquine for treating COVID-19" Heart Rhythm 17, no. 9 (2020): 1445 - 1451, https://doi.org/10.1016/j.hrthm.2020.05.030.
  3. Kaboudian, Abouzar, Elizabeth M. Cherry, and Flavio H. Fento. "Real-time interactive simulations of large-scale systems on personal computers and cell phones: Toward patient-specific heart modeling and other applications" Science advances 5, no. 3 (2019), https://doi.org/10.1126/sciadv.aav6019.
  4. Kaboudian, Abouzar, Elizabeth M. Cherry, and Flavio H. Fenton. "Large-scale interactive numerical experiments of chaos, solitons and fractals in real time via GPU in a web browser" Chaos, Solitons & Fractals 121 (2019): 6-29, https://doi.org/10.1016/j.chaos.2019.01.005.
  5. Kaboudian, Abouzar, H.A. Velasco-Prez, Shahriar Iravanian, Yohannes Shiferaw, Elizabeth M. Cherry, Flavio H. Fenton. "Comprehensive Comparison of GPU Implementations of Cardiac Electrophysiology Models. In: Bartocci E., Cleaveland R., Grosu R., Sokolsky O. (eds) From Reactive Systems to Cyber-Physical Systems." Lecture Notes in Computer Science 11500 (2019), https://doi.org/10.1007/978-3-030-31514-6_2.
  6. A.J. Welsh, C. Delgado, C.L. Trimble, A. Kaboudian, and F.H. Fenton. "Simulating waves, chaos and synchronization with a microcontroller" Chaos: An Interdisciplinary Journal of Nonlinear Science 29, no. 12 (2019): 123104, https://doi.org/10.1063/1.5094351.
  7. Z. Feng, J. Rong, A. Kaboudian, and B.C. Khoo. "The Modified Ghost Method for Compressible Multi-Medium Interaction with Elastic-Plastic Solid" Communications in Computational Physics 22, no. 5 (2017): 1258-1285, https://doi.org/10.4208/cicp.OA-2016-0212.
  8. Z. Feng, A. Kaboudian, and B.C. Khoo. "The Simulation of Compressible Multi-Fluid Multi-Solid Interactions using the Modified Ghost Method" Computers and Fluids 154 (2017): 12-26, https://doi.org/10.1016/j.compfluid.2017.05.017.
  9. R.C. Mysa, A. Kaboudian, R.K. Jaiman. "On the origin of wake-induced vibration in two tandem circular cylinders at low Reynolds number" Journal of Fluids and Structures 61 (2016): 76-98, https://doi.org/10.1016/j.jfluidstructs.2015.11.004.
  10. A. Kaboudian, P. Tavallali, and B.C. Khoo. "The ghost solid method for the elastic-plastic solid-solid interface and the ϑ-criterion" Journal of Computational Physics 302 (2015): 617-652, https://doi.org/10.1016/j.jcp.2015.09.023.
  11. A. Kaboudian, and B.C. Khoo. "The ghost solid method for solid-solid interactions" Journal of Computational Physics 257 (2014): 102-125, https://doi.org/10.1016/j.jcp.2013.09.042.
  12. P. Tavallali, A. Kaboudian, and V. V. Kulish. "Exact solution for phased-lagged heat equation in one dimensional domain" Mathematics in Engineering, Science and Aerospace 4, no. 4 (2013): 403-413.

Journal articles under review or in preparation

  1. I. Uzelac, A. Kaboudian, S. Iravanian, J.C. Gumbart, H. Ashikaga, N. Bhatia, R.F. Gilmour Jr., E.M. Cherry, and F.H. Fenton. "Whole Heart Optical Mapping Framework to Quantify Arrhythmic Effects of Therapeutics: Lessons from COVID-19 with Hydroxychloroquine and Azithromycin", Science Translational Medicine, Submitted.
  2. N. DeTal, A. Kaboudian, and F.H. Fenton. "Defibrillating with a Single Designed Stimulus", Physical Review Letters, Submitted.
  3. A. Kaboudian, E.M. Cherry and F.H. Fenton. "An interactive review of cardiac electrophysiological models in tissue", Circulation Research, in Preparation.
  4. A. Kaboudian, E.M. Cherry and F.H. Fenton. "A memory efficient and load balanced approach for GPU implementation of cardiac models on realistic cardiac geometries", Journal of Computational Physics, in Prepation.
  5. Y. Shiferaw, A. Kaboudian, and F.H. Fenton. "An interactive study of calcium waves in atrial tissue", Frontiers of Physiology, in Preparation.
  6. J. Tomek, M. Clerx, A. Kaboudian, B. Rodriguez, and F.H. Fenton. "Accelerating CellML models by converting them to a web application automatically", Science Advances, in Preparation.
  7. A. Aportela, F.H. Fenton, and A. Kaboudian. "A comparison of the performances of the Lattice Boltzmann and the Finite Difference Methods in GPU implementations of reaction diffusion models", Computational Physics, in Preparation.

Invited talks and workshops

  1. Kaboudian, Abouzar, "Fractals, Turing Patterns, and Cardiac Arrhythmia", Georgia Institute of Technology, Summer Research Experience for Undergraduates (REU), Atlanta, Georgia, USA, June 12, 2019.

  2. Kaboudian, Abouzar, "Interactive Computations of Fractals, Turing Patterns, Cardiac Arrhythmias, and Other Systems using WebGL 2.0", University of Washington, Seattle, WA, USA, June 5, 2019.

  3. Kaboudian, Abouzar, "Real-time Interactive Computations of Fractals, Turing Patterns, Cardiac Arrhythmias, and Other Systems using WebGL 2.0", University of Oregon, Eugene, OR, USA, May 31, 2019.

  4. Kaboudian, Abouzar, "Near Real-Time Study of Complex Human Cardiac Cell Models Applied to Cardiac Tissue in a Web-Browser", Integrative Cardiac Dynamics, Kavli Institute of Theoretical Physics, Santa Barbara, CA, USA, June 25-July 20, 2018.

  5. Kaboudian, Abouzar, "Supercomputer-Fast Interactive Cardiac Simulations in Tissue Using WebGL", Food and Drug Administration, Washington, D.C., USA, November 15, 2017.

  6. Kaboudian, Abouzar, "GPU Simulations of Heart Dynamics Close to Real Time and Over the Internet", Analysis of Spatiotemporal Complexity in Fluids Workshop, Georgia Institute of Technology, Atlanta, GA, USA, Sept 11-13, 2017.

  7. Kaboudian, Abouzar, "2D and 3D High Performance Cardiac Computations on Personal Computers", SIAM Conference on Applications of Dynamical Systems,, Snowbird, Utah, USA, May 21-25, 2017.

  8. Kaboudian, Abouzar, "High Performance Computation of Cardiac and Other Mathematical Models in Real-Time in the Modern Browsers", Virginia Commonwealth University, Richmond, VA, USA, May 18, 2017.

  9. Kaboudian, Abouzar, "GPU Simulations of Heart Dynamics Close to Real Time and Over the Internet", California State University, Northridge, CA, USA, April 11, 2017.


Conferences

  1. Kaboudian, Abouzar, and Flavio H. Fenton, "Real-time interactive computations of fractals, turing patterns, and cardiac arrhythmias using WebGL 2.0", SIAM Conference on Applications of Dynamical Systems, Snowbird, Utah, USA, May 19-23, 2019.

  2. Claire Yanyan, Abouzar Kaboudian, Hector A.V. Prez, and Flavio H. Fenton, "Improving Low-Energy Defibrillation Using WebGL", SIAM Conference on Applications of Dynamical Systems, Snowbird, Utah, USA, May 19-23, 2019.

  3. Kaboudian, Abouzar, Yanyan Claire Ji, Elizabeth M. Cherry, and Flavio H. Fenton, "Real-time interactive simulation of human atrial electrical activity on realistic 3D atrial structures using WebGL", Biology and Medicine Through Mathematics Conference, Richmond, VA, USA, May 15-17, 2019.

  4. Fenton, Flavio H., and Abouzar Kaboudian, "A Library for Real Time Interactive High Performance Computing of 2D and 3D Physics Problems through GPU", APS March Meeting 2019, Boston, MA, USA, March 4–8, 2019.

  5. Kaboudian, Abouzar, "Near Real-Time Study of Complex Human Cardiac Cell Models Applied to Cardiac Tissue in a Web-Browser", Integrative Cardiac Dynamics, Kavli Institute of Theoretical Physics, Santa Barbara, CA, USA, June 25-July 20, 2018.

  6. A. Kaboudian, "Near Real-Time Study of Complex Human Cardiac Cell Models Applied to Cardiac Tissue in a Web-Browser", Integrative Cardiac Dynamics, Kavli Institute of Theoretical Physics, Santa Barbara, CA, USA, June 25-July 20, 2018.

  7. Ji, Clair Yanyan, Abouzar Kaboudia, Flavio H. Fenton, "Exploring the Mechanism of Low Energy Defibrillation using Parallel GPU Computing", Biology and Medicine Through Mathematics, Richmond, VA, USA, May 30-June 01, 2018.

  8. Kaboudian, Abouzar, and Flavio H. Fenton, "Near Real-Time Interactive Cardiac Simulations in Tissue Using WebGL", 2017 SIAM Annual Meeting, Pittsburgh, Pennsylvania, USA, July 10-14, 2017.

  9. Kaboudian, Abouzar, and Flavio H. Fenton, "High Performance Computation of Cardiac Models in Real-Time using WebGL", Biology and Medicine through Mathematics, Richmond, VA, USA, May 18-20, 2017.

  10. Fenton, Flavio H., and Abouzar Kaboudian, "GPU Simulations of Heart Dynamics Close to Real Time and Over the Internet", SIAM Conference on Computational Science and Engineering, Atlanta, GA, USA, Feb 27-March 3, 2017.

  11. Kaboudian, Abouzar, and Flavio H. Fenton, "Near Real-Time Computations in Cardiac Tissue Using WebGL", SIAM Conference on the Life Sciences, Boston, USA, July 2016.

  12. H.A.V. Perez, \textbf{A. Kabooudian}, "Studying the Instabilities of Spiral Waves Due to Their Chirality in Anisotropic Cardiac Tissue using CUDA", 2017 SIAM Annual Meeting, Pittsburgh, Pennsylvania, USA, July 10-14, 2017.

  13. A. Kaboudian, F.H. Fenton, "2D and 3D High Performance Cardiac Computations on Personal Computers", SIAM Conference on Applications of Dynamical Systems, Snowbird, Utah, USA, May 21-25, 2017.

  14. A. Kaboudian, F.H. Fenton, "High Performance Computation of Cardiac Models in Real-Time using WebGL", Biology and Medicine through Mathematics, Richmond, VA, USA, May 18-20, 2017.

  15. F.H. Fenton, A. Kaboudian, "GPU Simulations of Heart Dynamics Close to Real Time and Over the Internet", SIAM Conference on Computational Science and Engineering, Atlanta, GA, USA, Feb 27-March 3, 2017.

  16. A. Kaboudian, F.H. Fenton, "Near Real-Time Computations in Cardiac Tissue Using WebGL", SIAM Conference on the Life Sciences, Boston, USA,, July 2016.

  17. A. Kaboudian, B.C. Khoo, "A homogeneous approach to wave propagation in elastic solids with spatial material property variations", 1st Pan-American Congress on Computational Mechanics, Buenos Aires, Argentine, April 2015.

  18. A. Kaboudian, B.C. Khoo, "A unified ghost solid method for the elastic solid-solid interface", The 9th International Conference on Computational Physics, Singapore, January 2015.

  19. A. Kaboudian, R.C. Mysa, R.K. Jaiman, "The effects of the external cross-flow excitation forces on the vortex-induced-vibrations of an oscillating cylinder", The 67th Annual Meeting of American Physical Society, San Francisco, CA, USA, November 2014.

  20. R.C. Mysa, A. Kaboudian, R.K. Jaiman, "Investigation of the wake interactions in tandem cylinder arrangements", The 67th Annual Meeting of American Physical Society, San Francisco, CA, USA, November 2014.

  21. A. Kaboudian, B.C. Khoo, "Numerical simulation of wave propagation in graded materials using the ghost solid method", MM-&-FGM 2014, Sao Paulo, Brazil, October 2014.

  22. A. Kaboudian, Y. Chen, R.K. Jaiman, V.B.C. Tan, "Time domain simulation of a full scale composite riser with vortex-induced vibrations and platform motion", OMAE 2014, San Francisco, CA, USA, June 2014.

  23. A. Kaboudian, B.C. Khoo, "The ghost solid method for elastic-plastic interface", Sino-German Center, Beijing, China, May 2014.

  24. A. Kaboudian, B.C. Khoo, "The ghost solid method for elastic-plastic solid-solid interface", CrateLS workshop, Bordeaux, France, March 2014.

  25. A. Kabudian, B.C. Khoo, "The ghost solid methods for stress waves impacting on solid-solid interfaces undergoing elastic-plastic deformation", ICTCA 2014, College Station, Texas, USA, March 2014.

  26. A. Kaboudian, B.C. Khoo, "The ghost solid methods for the elastic-plastic solid-solid interactions", 5th Thermal and Fluid Seminar, Singapore, December 2013.

  27. A. Kaboudian, B.C. Khoo, "The ghost solid methods for the elastic-plastic interface", APCOM & ISCM 2013, Singapore, December 2013.

  28. A. Kaboudian, B.C. Khoo, "The Ghost Solid Method Based Algorithms for Elastic Solid-Solid Interactions", 2012 SIAM Annual Meeting, Minneapolis, USA, July 9-13, 2012.

  29. A. Kaboudian, B.C. Khoo, "The Ghost Solid Method for Elastic Solid-Solid Interface", ICSC12, Nanjing, China, May 22-25, 2012.